pyclarity-lims

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Table of Contents:

  • Installation
  • Getting started
  • Practical Examples
  • Lims object
  • Entities

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Pyclarity-lims¶

Pyclarity-lims is a fork of genologics that we have extended and modified. Most of the initial logic still applies and the genologics module still exists as an alias for backward compatibility. However there are a few backward incompatible changes that have had to be made.

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Table of Contents:

  • Installation
  • Getting started
    • Lims connection
    • Searching the Lims
    • Retrieving object with their id
    • Lazy loading and caching
    • Looking beyond
  • Practical Examples
    • Change value of a UDF of all artifacts of a Step in progress
    • Find all the samples that went through a Step with a specific udf value
    • Make sure to have the up-to-date program status
    • Create sample with a Specific udfs
    • Start and complete a new Step from submitted samples
    • Mix samples in a pool using the api
    • Creating large number of Samples with create_batch
  • Lims object
  • Entities

Indices and tables¶

  • Index
  • Module Index
  • Search Page
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